Sequence Similarity Clusters for the Entities in PDB 1DO0

Entity #1 | Chains: A,B,C,D,E,F
PROTEIN (HEAT SHOCK LOCUS U) protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 692
95 % 8 12 903 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.0
PDBFlex
90 % 8 12 939
70 % 12 16 611
50 % 12 16 661
40 % 12 16 690
30 % 12 16 685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures