Sequence Similarity Clusters for the Entities in PDB 1DNW

Entity #1 | Chains: A,B
MYELOPEROXIDASE protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 1290
95 % 5 16 1534 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 5 16 1557
70 % 5 16 1579
50 % 5 16 1626
40 % 5 16 1613
30 % 5 16 1596
Entity #2 | Chains: C,D
MYELOPEROXIDASE protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 1289
95 % 5 16 1533 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 5 16 1556
70 % 5 16 1578
50 % 5 16 1625
40 % 5 16 1612
30 % 5 16 1595

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures