Sequence Similarity Clusters for the Entities in PDB 1DNW

Entity #1 | Chains: A,B
MYELOPEROXIDASE protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 1327
95 % 5 16 1567 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 5 16 1593
70 % 5 16 1617
50 % 5 16 1667
40 % 5 16 1654
30 % 5 16 1636
Entity #2 | Chains: C,D
MYELOPEROXIDASE protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 1326
95 % 5 16 1566 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 5 16 1592
70 % 5 16 1616
50 % 5 16 1666
40 % 5 16 1653
30 % 5 16 1635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures