Sequence Similarity Clusters for the Entities in PDB 1DNL

Entity #1 | Chains: A
PYRIDOXINE 5'-PHOSPHATE OXIDASE protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 8974
95 % 1 7 9211 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 1 7 9121
70 % 1 7 8744
50 % 1 7 7910
40 % 1 8 5846
30 % 1 8 5228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.