Sequence Similarity Clusters for the Entities in PDB 1DNK

Entity #1 | Chains: B
DNA (5'-D(*GP*GP*TP*AP*TP*AP*C)-3') dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
DNA (5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (DEOXYRIBONUCLEASE I (DNASE I) (E.C.3.1.21.1)) protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 10 5127
95 % 7 11 5162
90 % 7 11 5181
70 % 8 12 4558
50 % 8 12 4392
40 % 8 12 4181
30 % 8 12 3839

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.