Sequence Similarity Clusters for the Entities in PDB 1DN2

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA HEAVY CHAIN protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40186
95 % 86 147 114 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 90 153 114
70 % 91 154 127
50 % 94 161 145
40 % 94 161 161
30 % 3062 5342 1
Entity #2 | Chains: E,F
ENGINEERED PEPTIDE protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.