Sequence Similarity Clusters for the Entities in PDB 1DN0

Entity #1 | Chains: A,C
IGM-KAPPA COLD AGGLUTININ (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20072
95 % 26 74 279
90 % 198 644 3
70 % 569 1775 2
50 % 1436 4367 1
40 % 1436 4367 1
30 % 1604 5151 1
Entity #2 | Chains: B,D
IGM-KAPPA COLD AGGLUTININ (HEAVY CHAIN) protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37449
95 % 1 2 17134
90 % 1 2 16789
70 % 1 9 4122
50 % 1437 4367 1
40 % 1437 4367 1
30 % 1605 5151 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.