Sequence Similarity Clusters for the Entities in PDB 1DN0

Entity #1 | Chains: A,C
IGM-KAPPA COLD AGGLUTININ (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19768
95 % 25 73 274
90 % 193 632 3
70 % 561 1752 2
50 % 1402 4272 1
40 % 1402 4272 1
30 % 1562 5038 1
Entity #2 | Chains: B,D
IGM-KAPPA COLD AGGLUTININ (HEAVY CHAIN) protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36901
95 % 1 2 16880
90 % 1 2 16542
70 % 1 8 4332
50 % 1403 4272 1
40 % 1403 4272 1
30 % 1563 5038 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.