Sequence Similarity Clusters for the Entities in PDB 1DMY

Entity #1 | Chains: A,B
MURINE CARBONIC ANHYDRASE V protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20481
95 % 3 4 10463 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 4 10335
70 % 3 4 9831
50 % 713 740 13
40 % 734 764 18
30 % 765 810 24

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures