Sequence Similarity Clusters for the Entities in PDB 1DMY

Entity #1 | Chains: A,B
MURINE CARBONIC ANHYDRASE V protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20861
95 % 3 4 10610 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 4 10481
70 % 3 4 9973
50 % 732 759 13
40 % 755 785 18
30 % 786 831 23

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures