Sequence Similarity Clusters for the Entities in PDB 1DMU

Entity #1 | Chains: F
DNA (5'-D(*AP*TP*CP*GP*CP*CP*TP*AP*AP*TP*AP*GP*GP*CP*GP*AP*T)-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
BGLI RESTRICTION ENDONUCLEASE protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57398
95 % 1 1 41033
90 % 1 1 39171
70 % 1 1 34753
50 % 1 1 29661
40 % 1 1 26165
30 % 1 1 22223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures