Sequence Similarity Clusters for the Entities in PDB 1DMU

Entity #1 | Chains: F
DNA (5'-D(*AP*TP*CP*GP*CP*CP*TP*AP*AP*TP*AP*GP*GP*CP*GP*AP*T)-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
BGLI RESTRICTION ENDONUCLEASE protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56485
95 % 1 1 46381
90 % 1 1 44040
70 % 1 1 38724
50 % 1 1 32879
40 % 1 1 28798
30 % 1 1 23362

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures