Sequence Similarity Clusters for the Entities in PDB 1DMU

Entity #1 | Chains: F
DNA (5'-D(*AP*TP*CP*GP*CP*CP*TP*AP*AP*TP*AP*GP*GP*CP*GP*AP*T)-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
BGLI RESTRICTION ENDONUCLEASE protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51643
95 % 1 1 36906
90 % 1 1 35343
70 % 1 1 31544
50 % 1 1 27039
40 % 1 1 23877
30 % 1 1 20277

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.