Sequence Similarity Clusters for the Entities in PDB 1DMQ

Entity #1 | Chains: A
STEROID DELTA-ISOMERASE protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 22 1457
95 % 32 45 478 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 33 47 486
70 % 33 47 525
50 % 33 47 565
40 % 33 47 605
30 % 45 70 340

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures