Sequence Similarity Clusters for the Entities in PDB 1DM9

Entity #1 | Chains: A,B
HYPOTHETICAL 15.5 KD PROTEIN IN MRCA-PCKA INTERGENIC REGION protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35922
95 % 1 1 30799 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 29515
70 % 1 1 26451
50 % 1 2 12493
40 % 1 2 11193
30 % 1 2 9544

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1DM9 1 A, B HYPOTHETICAL 15.5 KD PROTEIN IN MRCA-PCKA INTERGENIC REGION 562