Sequence Similarity Clusters for the Entities in PDB 1DM9

Entity #1 | Chains: A,B
HYPOTHETICAL 15.5 KD PROTEIN IN MRCA-PCKA INTERGENIC REGION protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44764
95 % 1 1 33642 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 32162
70 % 1 1 28706
50 % 1 1 24497
40 % 1 1 21554
30 % 1 1 18253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.