Sequence Similarity Clusters for the Entities in PDB 1DM0

Entity #1 | Chains: A,L
SHIGA TOXIN A SUBUNIT protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18435
95 % 2 2 16372
90 % 2 2 16048
70 % 2 2 14945
50 % 5 6 7330
40 % 5 6 6757
30 % 5 6 5986
Entity #2 | Chains: B,C,D,E,F,G,H,I,J,K
SHIGA TOXIN B SUBUNIT protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 567
95 % 10 14 348
90 % 10 14 375
70 % 10 14 411
50 % 16 21 288
40 % 16 21 303
30 % 16 21 320

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.