Sequence Similarity Clusters for the Entities in PDB 1DLF

Entity #1 | Chains: L
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28784
95 % 1 3 25160 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 12 3797
70 % 5 215 66
50 % 13 317 23
40 % 14 361 27
30 % 126 7175 1
Entity #2 | Chains: H
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28654
95 % 1 3 23185 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 1 3 22438
70 % 27 409 9
50 % 32 609 6
40 % 88 5756 1
30 % 127 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures