Sequence Similarity Clusters for the Entities in PDB 1DLF

Entity #1 | Chains: L
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28604
95 % 1 3 23711 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 13 3299
70 % 1 20 1832
50 % 13 302 22
40 % 40 887 5
30 % 46 1013 7
Entity #2 | Chains: H
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28407
95 % 1 3 23557 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 1 3 22800
70 % 23 350 9
50 % 27 540 8
40 % 41 887 5
30 % 47 1013 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.