Sequence Similarity Clusters for the Entities in PDB 1DLF

Entity #1 | Chains: L
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29688
95 % 1 3 24615 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 13 3430
70 % 1 20 1896
50 % 13 308 22
40 % 43 934 5
30 % 50 1062 7
Entity #2 | Chains: H
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29487
95 % 1 3 24462 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 1 3 23656
70 % 25 384 9
50 % 30 581 7
40 % 44 934 5
30 % 51 1062 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures