Sequence Similarity Clusters for the Entities in PDB 1DLB

Entity #1 | Chains: A
HIV-1 ENVELOPE GLYCOPROTEIN GP41 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59358
95 % 7 13 3600 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.6
PDBFlex
90 % 7 13 3673
70 % 8 17 1715
50 % 8 17 1753
40 % 8 17 1746
30 % 10 29 959

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures