Sequence Similarity Clusters for the Entities in PDB 1DLB

Entity #1 | Chains: A
HIV-1 ENVELOPE GLYCOPROTEIN GP41 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70577
95 % 7 13 3566 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.5
PDBFlex
90 % 7 13 3616
70 % 8 17 1648
50 % 8 17 1683
40 % 8 17 1691
30 % 8 17 1654

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.