Sequence Similarity Clusters for the Entities in PDB 1DL7

Entity #1 | Chains: L
PROTEIN (ANTIBODY M3C65 (LIGHT CHAIN)) protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69582
95 % 7 12 2231 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 8 13 2200
70 % 8 13 2197
50 % 150 308 22
40 % 452 936 5
30 % 508 1065 7
Entity #2 | Chains: H
PROTEIN (ANTIBODY M3C65 (HEAVY CHAIN)) protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69298
95 % 1 1 47743
90 % 1 1 45255
70 % 19 36 1263
50 % 283 583 7
40 % 453 936 5
30 % 509 1065 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures