Sequence Similarity Clusters for the Entities in PDB 1DL7

Entity #1 | Chains: L
PROTEIN (ANTIBODY M3C65 (LIGHT CHAIN)) protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70837
95 % 7 12 2293 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 8 13 2264
70 % 8 13 2259
50 % 150 312 23
40 % 456 956 5
30 % 512 1085 7
Entity #2 | Chains: H
PROTEIN (ANTIBODY M3C65 (HEAVY CHAIN)) protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70550
95 % 1 1 48551
90 % 1 1 45987
70 % 39 76 538
50 % 287 599 6
40 % 457 956 5
30 % 513 1085 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures