Sequence Similarity Clusters for the Entities in PDB 1DL7

Entity #1 | Chains: L
PROTEIN (ANTIBODY M3C65 (LIGHT CHAIN)) protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63960
95 % 7 12 2335 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 7 12 2402
70 % 8 13 2247
50 % 152 319 21
40 % 172 363 27
30 % 2845 7269 1
Entity #2 | Chains: H
PROTEIN (ANTIBODY M3C65 (HEAVY CHAIN)) protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58174
95 % 1 1 51516
90 % 1 1 48852
70 % 39 76 543
50 % 294 613 6
40 % 2331 5834 1
30 % 2846 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures