Sequence Similarity Clusters for the Entities in PDB 1DKW

Entity #1 | Chains: A,B
TRIOSEPHOSPHATE ISOMERASE protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40485
95 % 21 23 1093 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 47 50 329
70 % 64 67 301
50 % 136 153 129
40 % 173 197 105
30 % 175 199 118

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures