Sequence Similarity Clusters for the Entities in PDB 1DKS

Entity #1 | Chains: A,B
CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8448
95 % 4 4 8508 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 4 4 8420
70 % 14 14 2715
50 % 14 14 2696
40 % 14 14 2649
30 % 14 14 2465

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1CKS 1 A, B, C CYCLIN-DEPENDENT KINASE SUBUNIT, TYPE 2 9606
2 6GU2 3 C Cyclin-dependent kinases regulatory subunit 2 9606
3 5LQF 3 C, F Cyclin-dependent kinases regulatory subunit 2 9606
4 5HQ0 3 C Cyclin-dependent kinases regulatory subunit 2 9606
5 4Y72 3 C Cyclin-dependent kinases regulatory subunit 2 residues 165-433 9606
6 6GU6 2 B Cyclin-dependent kinases regulatory subunit 2 9606
7 1BUH 2 B PROTEIN (CKSHS1 HUMAN) 9606
8 6GU3 3 C Cyclin-dependent kinases regulatory subunit 2 9606
9 6GU4 3 C Cyclin-dependent kinases regulatory subunit 2 9606
10 4YC6 2 B, D, F, H Cyclin-dependent kinases regulatory subunit 1 9606
11 4YC3 3 C Cyclin-dependent kinases regulatory subunit 2 N-terminal GST tag removed by 3C protease cleavage 9606
12 1DKT 1 A, B CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 9606
13 6GU7 2 B, D, F, H Cyclin-dependent kinases regulatory subunit 2 9606
14 1DKS 1 A, B CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 9606