Sequence Similarity Clusters for the Entities in PDB 1DKS

Entity #1 | Chains: A,B
CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8049
95 % 4 4 8101 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 4 4 8031
70 % 9 9 4037
50 % 9 9 3925
40 % 9 9 3726
30 % 9 9 3412

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1CKS 1 A, B, C CYCLIN-DEPENDENT KINASE SUBUNIT, TYPE 2 9606
2 5LQF 3 C, F Cyclin-dependent kinases regulatory subunit 2 9606
3 5HQ0 3 C Cyclin-dependent kinases regulatory subunit 2 9606
4 4Y72 3 C Cyclin-dependent kinases regulatory subunit 2 residues 165-433 9606
5 1BUH 2 B PROTEIN (CKSHS1 HUMAN) 9606
6 4YC6 2 B, D, F, H Cyclin-dependent kinases regulatory subunit 1 9606
7 4YC3 3 C Cyclin-dependent kinases regulatory subunit 2 N-terminal GST tag removed by 3C protease cleavage 9606
8 1DKT 1 A, B CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 9606
9 1DKS 1 A, B CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 9606