Sequence Similarity Clusters for the Entities in PDB 1DKS

Entity #1 | Chains: A,B
CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8284
95 % 4 4 8862 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 4 4 8812
70 % 14 14 2845
50 % 14 14 2862
40 % 14 14 2870
30 % 14 14 2848

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures