Sequence Similarity Clusters for the Entities in PDB 1DKS

Entity #1 | Chains: A,B
CYCLIN DEPENDENT KINASE SUBUNIT, TYPE 1 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 7794
95 % 4 4 8355 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 4 4 8299
70 % 9 9 3962
50 % 9 9 3849
40 % 9 9 3695
30 % 9 9 3458

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures