Sequence Similarity Clusters for the Entities in PDB 1DKI

Entity #1 | Chains: A,B,C,D
PYROGENIC EXOTOXIN B ZYMOGEN protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17788
95 % 1 2 8359 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 1 2 8299
70 % 1 2 7977
50 % 1 2 7285
40 % 1 2 6751
30 % 1 2 6000

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.