Sequence Similarity Clusters for the Entities in PDB 1DKI

Entity #1 | Chains: A,B,C,D
PYROGENIC EXOTOXIN B ZYMOGEN protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18659
95 % 1 2 8731 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 1 2 8662
70 % 1 2 8339
50 % 1 2 7612
40 % 1 2 7048
30 % 1 2 6261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures