Sequence Similarity Clusters for the Entities in PDB 1DKH

Entity #1 | Chains: A
HEME-BINDING PROTEIN A protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 3811
95 % 9 10 4258 Flexibility: Medium
Max RMSD: 22.8, Avg RMSD: 6.5
PDBFlex
90 % 9 10 4281
70 % 9 10 4202
50 % 22 23 1691
40 % 22 23 1707
30 % 25 26 1188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.