Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36805
95 % 1 1 27961
90 % 1 1 26811
70 % 1 1 24088
50 % 1 1 20672
40 % 1 1 18228
30 % 1 1 15434
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47324
95 % 1 1 34409
90 % 1 1 32969
70 % 1 1 29474
50 % 89 89 331
40 % 89 89 355
30 % 90 90 364

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.