Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35490
95 % 1 1 26997
90 % 1 1 25900
70 % 1 1 23279
50 % 1 1 19997
40 % 1 1 17651
30 % 1 1 14959
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45652
95 % 1 1 33252
90 % 1 1 31870
70 % 1 1 28523
50 % 80 80 372
40 % 80 80 406
30 % 81 81 402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.