Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38288
95 % 1 1 29053
90 % 1 1 27852
70 % 1 1 25026
50 % 1 1 21439
40 % 1 1 18866
30 % 1 1 15968
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49167
95 % 1 1 35697
90 % 1 1 34189
70 % 1 1 30550
50 % 114 114 245
40 % 114 114 270
30 % 115 115 272

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.