Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41247
95 % 1 1 31309
90 % 1 1 29959
70 % 1 1 26810
50 % 1 1 22883
40 % 1 1 20133
30 % 1 1 17050
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52909
95 % 1 1 38439
90 % 1 1 36738
70 % 1 1 32689
50 % 116 116 274
40 % 116 116 295
30 % 117 117 294

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.