Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37294
95 % 1 1 28321
90 % 1 1 27156
70 % 1 1 24412
50 % 1 1 20934
40 % 1 1 18441
30 % 1 1 15619
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47969
95 % 1 1 34872
90 % 1 1 33415
70 % 1 1 29881
50 % 89 89 337
40 % 89 89 367
30 % 90 90 372

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.