Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40595
95 % 1 1 30822
90 % 1 1 29504
70 % 1 1 26451
50 % 1 1 22613
40 % 1 1 19896
30 % 1 1 16850
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52133
95 % 1 1 37873
90 % 1 1 36219
70 % 1 1 32280
50 % 116 116 272
40 % 116 116 288
30 % 117 117 291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.