Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36554
95 % 1 1 27785
90 % 1 1 26643
70 % 1 1 23942
50 % 1 1 20554
40 % 1 1 18135
30 % 1 1 15354
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47029
95 % 1 1 34208
90 % 1 1 32777
70 % 1 1 29310
50 % 82 82 377
40 % 82 82 403
30 % 83 83 398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.