Sequence Similarity Clusters for the Entities in PDB 1DKG

Entity #1 | Chains: A,B
NUCLEOTIDE EXCHANGE FACTOR GRPE protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39982
95 % 1 1 30343
90 % 1 1 29067
70 % 1 1 26079
50 % 1 1 22301
40 % 1 1 19623
30 % 1 1 16615
Entity #2 | Chains: D
MOLECULAR CHAPERONE DNAK protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51322
95 % 1 1 37262
90 % 1 1 35660
70 % 1 1 31801
50 % 116 116 263
40 % 116 116 287
30 % 117 117 285

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.