Sequence Similarity Clusters for the Entities in PDB 1DKE

Entity #1 | Chains: A,C
HEMOGLOBIN: ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 120 207 25
95 % 140 238 31
90 % 141 239 32
70 % 170 319 17
50 % 400 722 5
40 % 405 727 8
30 % 808 1166 8
Entity #2 | Chains: B,D
HEMOGLOBIN: BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 89 157 51
95 % 148 238 30
90 % 151 243 28
70 % 185 333 11
50 % 401 722 5
40 % 406 727 8
30 % 809 1166 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.