Sequence Similarity Clusters for the Entities in PDB 1DK1

Entity #1 | Chains: B
RRNA FRAGMENT rna, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
30S RIBOSOMAL PROTEIN S15 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 45360
95 % 27 277 39
90 % 27 277 43
70 % 27 277 55
50 % 36 406 27
40 % 36 409 36
30 % 36 409 56

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.