Sequence Similarity Clusters for the Entities in PDB 1DK0

Entity #1 | Chains: A,B
HEME-BINDING PROTEIN A protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 4194
95 % 1 10 4613 Flexibility: Medium
Max RMSD: 22.8, Avg RMSD: 7.9
PDBFlex
90 % 1 10 4646
70 % 1 10 4556
50 % 13 29 1258
40 % 13 29 1267
30 % 15 32 989

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures