Sequence Similarity Clusters for the Entities in PDB 1DJB

Entity #1 | Chains: A
BETA-LACTAMASE protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 12737
95 % 7 15 3998 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 7 15 4065
70 % 7 15 3972
50 % 7 15 3853
40 % 314 393 51
30 % 321 401 68

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3BLM 1 A BETA-LACTAMASE 1280 3.5.2.6 | Details
2 1DJC 1 A BETA-LACTAMASE SOAKED WITH AMPICILLIN BUT DENSITY WAS UNINTERPRETABLE 1280 3.5.2.6 | Details
3 1DJB 1 A BETA-LACTAMASE 1280 3.5.2.6 | Details
4 1BLC 1 A BETA-LACTAMASE 1280 3.5.2.6 | Details
5 1BLH 1 A BETA-LACTAMASE 1280 3.5.2.6 | Details
6 1BLP 1 A BETA-LACTAMASE 1280 3.5.2.6 | Details