Sequence Similarity Clusters for the Entities in PDB 1DIO

Entity #1 | Chains: A,L
PROTEIN (DIOL DEHYDRATASE) protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3130
95 % 7 8 3874 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 7 8 3914
70 % 8 10 3030
50 % 8 10 2979
40 % 8 10 2940
30 % 8 10 2758
Entity #2 | Chains: B,E
PROTEIN (DIOL DEHYDRATASE) protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3365
95 % 7 8 4141 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 7 8 4171
70 % 7 8 4107
50 % 7 8 3962
40 % 7 8 3784
30 % 7 8 3525
Entity #3 | Chains: G,M
PROTEIN (DIOL DEHYDRATASE) protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3406
95 % 7 8 4180 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 7 8 4208
70 % 7 8 4143
50 % 7 8 3989
40 % 7 8 3817
30 % 7 8 3558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.