Sequence Similarity Clusters for the Entities in PDB 1DIO

Entity #1 | Chains: A,L
PROTEIN (DIOL DEHYDRATASE) protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3217
95 % 7 8 3965 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 7 8 4006
70 % 8 10 3113
50 % 8 10 3055
40 % 8 10 3001
30 % 8 10 2816
Entity #2 | Chains: B,E
PROTEIN (DIOL DEHYDRATASE) protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3454
95 % 7 8 4238 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 7 8 4268
70 % 7 8 4200
50 % 7 8 4038
40 % 7 8 3858
30 % 7 8 3591
Entity #3 | Chains: G,M
PROTEIN (DIOL DEHYDRATASE) protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3496
95 % 7 8 4278 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 7 8 4308
70 % 7 8 4238
50 % 7 8 4071
40 % 7 8 3894
30 % 7 8 3625

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures