Sequence Similarity Clusters for the Entities in PDB 1DII

Entity #1 | Chains: A,B
P-CRESOL METHYLHYDROXYLASE protein, length: 521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10109
95 % 4 4 10164 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 4 4 10036
70 % 4 4 9532
50 % 4 4 8633
40 % 4 4 7914
30 % 9 26 1114
Entity #2 | Chains: C,D
P-CRESOL METHYLHYDROXYLASE protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14183
95 % 3 3 13444 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 3 13227
70 % 3 3 12440
50 % 3 3 11094
40 % 3 3 10061
30 % 3 3 8770

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures