Sequence Similarity Clusters for the Entities in PDB 1DHP

Entity #1 | Chains: A,B
DIHYDRODIPICOLINATE SYNTHASE protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 16 1628
95 % 18 20 1481 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 19 21 1421
70 % 19 21 1438
50 % 30 41 691
40 % 61 77 262
30 % 142 171 110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3A5F 1 A, B Dihydrodipicolinate synthase 1491 4.3.3.7 | Details
2 3B4U 1 A, B Dihydrodipicolinate synthase 1176649
3 4I7W 1 A, B Dihydrodipicolinate synthase 861208 4.3.3.7 | Details
4 3DAQ 1 A, B, C, D Dihydrodipicolinate synthase residues 2-293 1280 4.3.3.7 | Details
5 3TAK 1 A, B Dihydrodipicolinate synthase UNP residues 7-297 470 4.3.3.7 | Details
6 4I7V 1 A, B, C, D Dihydrodipicolinate synthase 861208 4.3.3.7 | Details
7 2WKJ 1 A, B, C, D N-ACETYLNEURAMINATE LYASE SCHIFF BASE BETWEEN K165 AND PYRUVATE RESIDUES 2-296 562 4.1.3.3 | Details
8 5HWN 1 A, B, C, D Probable 5-dehydro-4-deoxyglucarate dehydratase 1176649 4.2.1.41 | Details
9 4O0K 1 A Dihydrodipicolinate synthetase 29459 3.5.4.22 | Details
10 2RFG 1 A, B, C, D Dihydrodipicolinate synthase 158327 4.3.3.7 | Details
11 4UR7 1 A, B, C, D KETO-DEOXY-D-GALACTARATE DEHYDRATASE RESIDUES 3-303 358 4.2.1.41 | Details
12 3LBM 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
13 3QZE 1 A, B, C, D Dihydrodipicolinate synthase 287 4.3.3.7 | Details
14 6ARH 1 A, B, C, D N-acetylneuraminate lyase 9606 4.1.3.3 | Details
15 4NQ1 1 A, B 4-hydroxy-tetrahydrodipicolinate synthase 446 4.3.3.7 | Details
16 1F74 1 A, C N-ACETYL-NEURAMINATE LYASE 727 4.1.3.3 | Details
17 4I7U 1 A, B, C, D Dihydrodipicolinate synthase 861208 4.3.3.7 | Details
18 2XFW 1 A, B, C, D N-ACETYLNEURAMINIC ACID LYASE RESIDUES 2-297 562 4.1.3.3 | Details
19 5HWJ 1 A, B, C, D Probable 5-dehydro-4-deoxyglucarate dehydratase 1176649 4.2.1.41 | Details
20 5AFD 1 A N-ACETYLNEURAMINATE LYASE 40269 4.1.3.3 | Details
21 1F6K 1 A, C N-ACETYLNEURAMINATE LYASE 727 4.1.3.3 | Details
22 5KZE 1 A, B, C, D, E, F, G, H N-acetylneuraminate lyase 1280 4.1.3.3 | Details
23 6MQH 1 A, B 4-hydroxy-tetrahydrodipicolinate synthase BumaA.01530.a.B1 13373 4.3.3.7 | Details
24 1O5K 1 A, B 4-hydroxy-tetrahydrodipicolinate synthase 2336 4.3.3.7 | Details
25 5LKY 1 A, B, C, D N-acetylneuraminate lyase 1280 4.1.3.3 | Details
26 4MPQ 1 A Dihydrodipicolinate synthetase BrmeB.01563.a.B1 29459 3.5.4.22 | Details
27 1W3I 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
28 2PUR 1 A, B Dihydrodipicolinate synthase 83333 4.3.3.7 | Details
29 3M5V 1 A, B, C, D Dihydrodipicolinate synthase 197 4.3.3.7 | Details
30 3RK8 1 A, B Dihydrodipicolinate synthase DHDPS, residues in UNP 7-297 470 4.3.3.7 | Details
31 2OJP 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
32 4UUI 1 A, B, C, D N-ACETYLNEURAMINATE LYASE SCHIFF BASE BETWEEN LYS165 AND PYRUVATE IN CHAINS A, B, C AND D. 562 4.1.3.3 | Details
33 4DXV 1 A, B Dihydrodipicolinate synthase UNP residues 7-297 470 4.3.3.7 | Details
34 5A8G 1 A, B N-ACETYLNEURAMINATE LYASE SCHIFF BASE BETWEEN K165 AND FLUOROPYRUVATE 1280 4.1.3.3 | Details
35 2NUW 1 A, B 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase 2285 4.1.2.55 | Details
36 2R8W 1 A, B AGR_C_1641p 1176649
37 4IME 1 A, B, C, D, E, F, G, H N-acetylneuraminate lyase 747 4.1.3.3 | Details
38 2WNN 1 A, B, C, D N-ACETYLNEURAMINATE LYASE SCHIFF BASE BETWEEN LYS165 AND PYRUVATE IN ALL CHAINS RESIDUES 2-296 562 4.1.3.3 | Details
39 3LER 1 A, B, C, D Dihydrodipicolinate synthase 197 4.3.3.7 | Details
40 1F7B 1 A, C N-ACETYL-NEURAMINATE LYASE 727 4.1.3.3 | Details
41 3LCG 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
42 3G0S 1 A, B Dihydrodipicolinate synthase 28901 4.3.3.7 | Details
43 4N4P 1 A, B, C, D Acylneuraminate lyase 2109 4.1.3.3 | Details
44 5ZKA 1 A N-acetylneuraminate lyase Pyruvate covalently bound through a Schiff base to Lys161 851 4.1.3.3 | Details
45 5ZKA 2 B N-acetylneuraminate lyase UNP residues 1-289 851 4.1.3.3 | Details
46 3U8G 1 A, B Dihydrodipicolinate synthase UNP residues 7-297 470 4.3.3.7 | Details
47 4LY8 1 A, B, C, D 4-hydroxy-tetrahydrodipicolinate synthase 197 4.3.3.7 | Details
48 1HL2 1 A, B, C, D N-ACETYLNEURAMINATE LYASE SUBUNIT 562 4.1.3.3 | Details
49 4FHA 1 A, B Dihydrodipicolinate synthase 1313 4.3.3.7 | Details
50 4IMC 1 A, B, C, D N-acetylneuraminate lyase 747 4.1.3.3 | Details
51 3LCL 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
52 3E96 1 A, B Dihydrodipicolinate synthase 79880 4.3.3.7 | Details
53 4IMG 1 A, B N-acetylneuraminate lyase 747 4.1.3.3 | Details
54 1XKY 1 A, B, C, D dihydrodipicolinate synthase 1392 4.3.3.7 | Details
55 4IMF 1 A, B N-acetylneuraminate lyase 747 4.1.3.3 | Details
56 2ATS 1 A, B dihydrodipicolinate synthase 562 4.3.3.7 | Details
57 2WNQ 1 A, B, C, D N-ACETYLNEURAMINATE LYASE RESIDUES 2-297 562 4.1.3.3 | Details
58 3LCF 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
59 3VFL 1 A, B Dihydrodipicolinate synthase 1313 4.3.3.7 | Details
60 3PB2 1 A, B, C, D, E, F Dihydrodipicolinate synthase 2336 4.3.3.7 | Details
61 4DPP 1 A, B Dihydrodipicolinate synthase 2, chloroplastic 3702 4.3.3.7 | Details
62 1YXC 1 A, B dihydrodipicolinate synthase 562 4.3.3.7 | Details
63 3LBC 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
64 2A6N 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
65 2WNZ 1 A, B, C, D N-ACETYLNEURAMINATE LYASE RESIDUES 2-297 562 4.1.3.3 | Details
66 2YDA 1 A, B 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
67 3FLU 1 A, B, C, D Dihydrodipicolinate synthase 487 4.3.3.7 | Details
68 3PB0 1 A, B, C, D Dihydrodipicolinate synthase 2336 4.3.3.7 | Details
69 5KTL 1 A, B 4-hydroxy-tetrahydrodipicolinate synthase mismatch at 201 position due naming of modified lysine (here called KPI) 264691 4.3.3.7 | Details
70 1W37 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
71 5T25 1 A, B 4-hydroxy-tetrahydrodipicolinate synthase 562 4.3.3.7 | Details
72 1YXD 1 A, B dihydrodipicolinate synthase 562 4.3.3.7 | Details
73 3UQN 1 A, B Dihydrodipicolinate synthase UNP residues 7-297 470 4.3.3.7 | Details
74 1F5Z 1 A, B, C, D N-ACETYLNEURAMINATE LYASE 727 4.1.3.3 | Details
75 2HMC 1 A Dihydrodipicolinate synthase 1176649
76 4M19 1 A, B, C, D 4-hydroxy-tetrahydrodipicolinate synthase 197 4.3.3.7 | Details
77 2YGY 1 A, B, C, D N-ACETYLNEURAMINATE LYASE 562 4.1.3.3 | Details
78 4PTN 1 A, B, C, D Probable 2-keto-3-deoxy-galactonate aldolase YagE 562 4.1.2.51 | Details
79 4R53 1 A, B, C, D 4-hydroxy-tetrahydrodipicolinate synthase 197 4.3.3.7 | Details
80 4WOZ 1 A, B, C, D, E, F, G, H N-acetylneuraminate lyase 1496 4.1.3.3 | Details
81 1W3T 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
82 4AHQ 1 A, B, C, D N-ACETYLNEURAMINATE LYASE RESIDUES 2-293 1280 4.1.3.3 | Details
83 1W3N 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
84 3TDF 1 A, B Dihydrodipicolinate synthase UNP residues 7-297 470 4.3.3.7 | Details
85 4BWL 1 A, B, D N-ACETYLNEURAMINATE LYASE SCHIFF BASE BETWEEN LYS165 AND N-ACETYLNEURAMINIC ACID 562 4.1.3.3 | Details
86 4BWL 2 C N-ACETYLNEURAMINATE LYASE SCHIFF BASE BETWEEN LYS165 AND PYRUVATE 562 4.1.3.3 | Details
87 2EHH 1 A, C, D, E Dihydrodipicolinate synthase 63363 4.3.3.7 | Details
88 2R91 1 A, B, C, D 2-Keto-3-deoxy-(6-phospho-)gluconate aldolase 2271 4.1.2.14 | Details 4.1.2.51 | Details
89 4DPQ 1 A, B Dihydrodipicolinate synthase 2, chloroplastic 3702 4.3.3.7 | Details
90 2PCQ 1 A Putative dihydrodipicolinate synthase 274 4.3.3.7 | Details
91 1F73 1 A, B, C, D N-ACETYL NEURAMINATE LYASE 727 4.1.3.3 | Details
92 3S5O 1 A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial 9606 4.1.3.16 | Details
93 3HIJ 1 A, B, C, D Dihydrodipicolinate synthase 1392 4.3.3.7 | Details
94 5T26 1 A, B 4-hydroxy-tetrahydrodipicolinate synthase 562 4.3.3.7 | Details
95 3DU0 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
96 3D0C 1 A, B Dihydrodipicolinate synthase 182710 4.3.3.7 | Details
97 3IRD 1 A Dihydrodipicolinate synthase 1491 4.3.3.7 | Details
98 2A6L 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
99 3NA8 1 A, B, C, D putative dihydrodipicolinate synthetase 287 4.3.3.7 | Details
100 4OE7 1 A, B, C, D Probable 2-keto-3-deoxy-galactonate aldolase YagE 562 4.1.2.51 | Details
101 4AHO 1 A, B, C, D N-ACETYLNEURAMINATE LYASE CHEMICAL MODIFICATION THIA-LYSINE AT POSITION 165. MISSING LOOP 138-146 CHAIN A, B, C, D 1280 4.1.3.3 | Details
102 2VC6 1 A, B DIHYDRODIPICOLINATE SYNTHASE PYRUVATE COVALENTLY BOUND TO K161 382 4.3.3.7 | Details
103 3LCH 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
104 5UI3 1 A, B, C, D Dihydrodipicolinate synthase 3055
105 2V9D 1 A, B, C, D YAGE RESIDUES 3-309 562 4.1.2.51 | Details
106 3L21 1 A, B, C, D, E, F Dihydrodipicolinate synthase 1773 4.3.3.7 | Details
107 2WPB 1 A, B, C, D N-ACETYLNEURAMINATE LYASE SCHIFF BASE BETWEEN LYS165 AND PYRUVATE IN ALL CHAINS RESIDUES 2-297 562 4.1.3.3 | Details
108 5F1V 1 A, B, C, D 4-hydroxy-tetrahydrodipicolinate synthase 197 4.3.3.7 | Details
109 4IMD 1 A, B, C, D N-acetylneuraminate lyase 747 4.1.3.3 | Details
110 3I7Q 1 A, B Dihydrodipicolinate synthase dihydrodipicolinate synthase 562 4.3.3.7 | Details
111 2YXG 1 A, B, C, D Dihydrodipicolinate synthase 2190 4.3.3.7 | Details
112 4MLJ 1 A, B, C, D dihydrodipicolinate synthase 197 4.3.3.7 | Details
113 3SI9 1 A, B, C, D Dihydrodipicolinate synthase 38323 4.3.3.7 | Details
114 1XXX 1 A, B, C, D, E, F, G, H Dihydrodipicolinate synthase 1773 4.3.3.7 | Details
115 4EOU 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
116 3I7R 1 A, B Dihydrodipicolinate synthase dihydrodipicolinate synthase 562 4.3.3.7 | Details
117 3EB2 1 A, B, C, D Putative dihydrodipicolinate synthetase 1076 4.3.3.7 | Details
118 4AHP 1 A, B, C, D N-ACETYLNEURAMINATE LYASE RESIDUES 2-293 1280 4.1.3.3 | Details
119 5HWM 1 A, B, C, D Probable 5-dehydro-4-deoxyglucarate dehydratase 1176649 4.2.1.41 | Details
120 3N2X 1 A, B, C, D Uncharacterized protein yagE UNP residues 12-309 562 4.1.2.51 | Details
121 3TUU 1 A, B, C, D, E, F, G, H dihydrodipicolinate synthase 29760 4.3.3.7 | Details
122 4WOQ 1 A, B, C, D, E, F, G, H N-acetylneuraminate lyase 1496 4.1.3.3 | Details
123 3LCX 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
124 3DEN 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
125 2R94 1 A, B, C, D 2-Keto-3-deoxy-(6-phospho-)gluconate aldolase 2271 4.1.2.14 | Details 4.1.2.51 | Details
126 4PFM 1 A, B 4-hydroxy-tetrahydrodipicolinate synthase 43661 4.3.3.7 | Details
127 3DI1 1 A, B Dihydrodipicolinate synthase 1280 4.3.3.7 | Details
128 2V8Z 1 A, B, C, D YAGE RESIDUES 3-309 562 4.1.2.51 | Details
129 3LCI 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
130 4N4Q 1 A, B, C, D Acylneuraminate lyase 2109 4.1.3.3 | Details
131 3NEV 1 A, B, C, D Uncharacterized protein yagE UNP residues 12-309 562 4.1.2.51 | Details
132 1F6P 1 A, B, C, D N-ACETYL NEURAMINATE LYASE 727 4.1.3.3 | Details
133 1S5T 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
134 4UR8 1 A, B, C, D KETO-DEOXY-D-GALACTARATE DEHYDRATASE 358 4.2.1.41 | Details
135 5F1U 1 A, B, C, D 4-hydroxy-tetrahydrodipicolinate synthase 197 4.3.3.7 | Details
136 1S5W 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
137 1XL9 1 A, B, C, D dihydrodipicolinate synthase 1392 4.3.3.7 | Details
138 1NAL 1 1, 2, 3, 4 N-ACETYLNEURAMINATE LYASE 562 4.1.3.3 | Details
139 3C0J 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
140 2WO5 1 A, B, C, D N-ACETYLNEURAMINATE LYASE RESIDUES 2-297 562 4.1.3.3 | Details
141 2NUY 1 A, B 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase 2285 4.1.2.55 | Details
142 1DHP 1 A, B DIHYDRODIPICOLINATE SYNTHASE 562 4.3.3.7 | Details
143 4MLR 1 A, B, C, D, E, F, G, H dihydrodipicolinate synthase 197 4.3.3.7 | Details
144 3I7S 1 A, B Dihydrodipicolinate synthase dihydrodipicolinate synthase 562 4.3.3.7 | Details
145 6G3Z 1 A, B 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details
146 5CZJ 1 A, B Dihydrodipicolinate synthase 382 3.5.4.22 | Details
147 4HNN 1 A, B, C, D, E, F, G, H Dihydrodipicolinate synthase 29760
148 3PUL 1 A, B Dihydrodipicolinate synthase DHDPS, residues in UNP 7-297 470 4.3.3.7 | Details
149 4AMA 1 A, B, C, D N-ACETYLNEURAMINATE LYASE CHEMICAL MODIFICATION THIA-LYSINE AT POSITION 165 IN CHAINS A, B, C, D BOUND TO PYRUVATE THROUGH A SCHIFF BASE 1280 4.1.3.3 | Details
150 5KZD 1 A, B, C, D N-acetylneuraminate lyase 1280 4.1.3.3 | Details
151 1S5V 1 A, B Dihydrodipicolinate synthase 562 4.3.3.7 | Details
152 4AH7 1 A, B, C, D N-ACETYLNEURAMINATE LYASE LYSINE AT POSITION 165 IS BOUND WITH PYRUVATE THROUGH SCHIFF BASE 1280 4.1.3.3 | Details
153 3CPR 1 A, B Dihydrodipicolinate synthetase 1718 4.3.3.7 | Details
154 2NUX 1 A, B 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase 2285 4.1.2.55 | Details
155 5J5D 1 A 4-hydroxy-tetrahydrodipicolinate synthase 1773 4.3.3.7 | Details
156 3DI0 1 A, B Dihydrodipicolinate synthase 1280 4.3.3.7 | Details
157 5UD6 1 A, B, C, D Dihydrodipicolinate synthase 45157
158 4ICN 1 A, B DIHYDRODIPICOLINATE SYNTHASE 43661 4.3.3.7 | Details
159 1FDY 1 A, B, C, D N-ACETYLNEURAMINATE LYASE COVALENT COMPLEX 562 4.1.3.3 | Details
160 3LCW 1 A, B, C, D N-acetylneuraminate lyase 562 4.1.3.3 | Details
161 3S5N 1 A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial 9606 4.1.3.16 | Details
162 1FDZ 1 A, B, C, D N-ACETYLNEURAMINATE LYASE COVALENT COMPLEX, OBTAINED BY REDUCTION WITH BOROHYDRIDE FROM AN ENZYME - SIALIC ACID MIX 562 4.1.3.3 | Details
163 3PUE 1 A, B Dihydrodipicolinate synthase DHDPS, residues in UNP 7-297 470 4.3.3.7 | Details
164 3PUO 1 A, B Dihydrodipicolinate synthase 287 4.3.3.7 | Details
165 3S8H 1 A, B Dihydrodipicolinate synthase 287 4.3.3.7 | Details
166 3PUD 1 A, B Dihydrodipicolinate synthase DHDPS, residues in UNP 7-297 470 4.3.3.7 | Details
167 3TCE 1 A, B Dihydrodipicolinate synthase UNP residues 7-297 470 4.3.3.7 | Details
168 3PS7 1 A, B Dihydrodipicolinate synthase 287 4.3.3.7 | Details
169 4ONV 1 A, B, C, D Probable 2-keto-3-deoxy-galactonate aldolase YagE 562 4.1.2.51 | Details
170 3NOE 1 A, B Dihydrodipicolinate synthase 287 4.3.3.7 | Details
171 4U4M 1 A, B, C, D YagE 562 4.1.2.51 | Details