Sequence Similarity Clusters for the Entities in PDB 1DHK

Entity #1 | Chains: A
PORCINE PANCREATIC ALPHA-AMYLASE protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53349
95 % 5 17 2740 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 5 17 2789
70 % 23 79 581
50 % 24 83 593
40 % 27 92 570
30 % 27 92 565
Entity #2 | Chains: B
BEAN LECTIN-LIKE INHIBITOR protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41388
95 % 1 2 31661 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 30452
70 % 1 2 27311
50 % 9 88 185
40 % 29 161 102
30 % 29 161 114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures