Sequence Similarity Clusters for the Entities in PDB 1DHK

Entity #1 | Chains: A
PORCINE PANCREATIC ALPHA-AMYLASE protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52358
95 % 5 17 2678 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 5 17 2728
70 % 23 78 585
50 % 24 82 599
40 % 27 91 575
30 % 27 91 571
Entity #2 | Chains: B
BEAN LECTIN-LIKE INHIBITOR protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40585
95 % 1 2 31098 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 29929
70 % 1 2 26863
50 % 9 88 180
40 % 29 161 101
30 % 29 161 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures