Sequence Similarity Clusters for the Entities in PDB 1DHK

Entity #1 | Chains: A
PORCINE PANCREATIC ALPHA-AMYLASE protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51623
95 % 5 17 2627 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 5 17 2674
70 % 22 77 586
50 % 23 81 596
40 % 26 90 569
30 % 26 90 570
Entity #2 | Chains: B
BEAN LECTIN-LIKE INHIBITOR protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39984
95 % 1 2 30650 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 29509
70 % 1 2 26515
50 % 9 88 173
40 % 29 161 98
30 % 29 161 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.