Sequence Similarity Clusters for the Entities in PDB 1DGW

Entity #1 | Chains: A
CANAVALIN protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 6153
95 % 1 6 6719
90 % 1 6 6699
70 % 1 6 6504
50 % 1 6 6039
40 % 1 6 5638
30 % 1 6 5045
Entity #2 | Chains: X
CANAVALIN protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22970
95 % 1 2 19590
90 % 1 2 19063
70 % 1 2 17590
50 % 1 2 15333
40 % 1 2 13691
30 % 1 2 11722
Entity #3 | Chains: Y
CANAVALIN protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22793
95 % 1 2 19439
90 % 1 2 18911
70 % 1 2 17446
50 % 1 2 15211
40 % 1 2 13573
30 % 1 2 11626

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.