Sequence Similarity Clusters for the Entities in PDB 1DGR

Entity #1 | Chains: A,B,C
CANAVALIN protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6201
95 % 4 6 6779
90 % 4 6 6755
70 % 4 6 6565
50 % 4 6 6095
40 % 4 6 5688
30 % 4 6 5088
Entity #2 | Chains: N,V,X
CANAVALIN protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23142
95 % 2 2 19743
90 % 2 2 19210
70 % 2 2 17716
50 % 2 2 15430
40 % 2 2 13774
30 % 2 2 11782
Entity #3 | Chains: M,W,Y
CANAVALIN protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22964
95 % 2 2 19591
90 % 2 2 19057
70 % 2 2 17572
50 % 2 2 15307
40 % 2 2 13656
30 % 2 2 11686

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.