Sequence Similarity Clusters for the Entities in PDB 1DGR

Entity #1 | Chains: A,B,C
CANAVALIN protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 5913
95 % 4 6 6479
90 % 4 6 6468
70 % 4 6 6298
50 % 4 6 5861
40 % 4 6 5484
30 % 4 6 4912
Entity #2 | Chains: N,V,X
CANAVALIN protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22216
95 % 2 2 18963
90 % 2 2 18460
70 % 2 2 17046
50 % 2 2 14876
40 % 2 2 13294
30 % 2 2 11386
Entity #3 | Chains: M,W,Y
CANAVALIN protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22046
95 % 2 2 18818
90 % 2 2 18313
70 % 2 2 16905
50 % 2 2 14755
40 % 2 2 13177
30 % 2 2 11292

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.