Sequence Similarity Clusters for the Entities in PDB 1DGR

Entity #1 | Chains: A,B,C
CANAVALIN protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6137
95 % 4 6 6707
90 % 4 6 6687
70 % 4 6 6493
50 % 4 6 6032
40 % 4 6 5630
30 % 4 6 5037
Entity #2 | Chains: N,V,X
CANAVALIN protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22932
95 % 2 2 19560
90 % 2 2 19037
70 % 2 2 17566
50 % 2 2 15313
40 % 2 2 13675
30 % 2 2 11712
Entity #3 | Chains: M,W,Y
CANAVALIN protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22755
95 % 2 2 19410
90 % 2 2 18886
70 % 2 2 17422
50 % 2 2 15191
40 % 2 2 13557
30 % 2 2 11616

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.