Sequence Similarity Clusters for the Entities in PDB 1DGR

Entity #1 | Chains: A,B,C
CANAVALIN protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6019
95 % 4 6 6581
90 % 4 6 6567
70 % 4 6 6392
50 % 4 6 5944
40 % 4 6 5554
30 % 4 6 4969
Entity #2 | Chains: N,V,X
CANAVALIN protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22644
95 % 2 2 19325
90 % 2 2 18814
70 % 2 2 17373
50 % 2 2 15150
40 % 2 2 13527
30 % 2 2 11592
Entity #3 | Chains: M,W,Y
CANAVALIN protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22468
95 % 2 2 19176
90 % 2 2 18662
70 % 2 2 17227
50 % 2 2 15027
40 % 2 2 13409
30 % 2 2 11496

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.