Sequence Similarity Clusters for the Entities in PDB 1DFV

Entity #1 | Chains: A,B
HUMAN NEUTROPHIL GELATINASE protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28705
95 % 33 36 347 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 41 44 317
70 % 45 48 313
50 % 47 51 360
40 % 47 51 378
30 % 68 78 267

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures