Sequence Similarity Clusters for the Entities in PDB 1DFU

Entity #1 | Chains: M
5S RRNA rna, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: N
5S RRNA rna, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
RIBOSOMAL PROTEIN L25 protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 148 116
95 % 1 148 159
90 % 1 148 168
70 % 1 148 193
50 % 1 149 228
40 % 1 149 246
30 % 1 149 255

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures