Sequence Similarity Clusters for the Entities in PDB 1DFN

Entity #1 | Chains: A,B
DEFENSIN HNP-3 protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 6027
95 % 19 21 994 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 20 25 866
70 % 20 25 897
50 % 20 25 944
40 % 20 25 970
30 % 20 25 949

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures