Sequence Similarity Clusters for the Entities in PDB 1DFL

Entity #1 | Chains: A,B
MYOSIN HEAD protein, length: 831 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 14 4305
95 % 10 14 4628 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 13 17 3727
70 % 17 21 2942
50 % 65 91 361
40 % 78 111 276
30 % 98 135 234
Entity #2 | Chains: W,Y
MYOSIN HEAD protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 18 3106
95 % 14 18 3417 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 14 18 3478
70 % 20 24 2193
50 % 25 47 539
40 % 238 361 40
30 % 294 432 43
Entity #3 | Chains: X,Z
MYOSIN HEAD protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 22 2049
95 % 18 22 2346 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 20 24 2181
70 % 20 24 2192
50 % 24 28 1897
40 % 239 361 40
30 % 295 432 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures