Sequence Similarity Clusters for the Entities in PDB 1DFK

Entity #1 | Chains: A
MYOSIN HEAD protein, length: 830 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 14 3386
95 % 11 14 4156 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 14 17 3298
70 % 18 21 2660
50 % 26 48 444
40 % 73 99 281
30 % 95 124 234
Entity #2 | Chains: Y
MYOSIN HEAD protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 18 2579
95 % 15 18 3219 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 15 18 3266
70 % 21 24 2078
50 % 26 47 500
40 % 228 336 33
30 % 249 363 47
Entity #3 | Chains: Z
MYOSIN HEAD protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 17 2794
95 % 21 24 2028 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 21 24 2079
70 % 21 24 2081
50 % 25 28 1779
40 % 229 336 33
30 % 250 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.