Sequence Similarity Clusters for the Entities in PDB 1DFK

Entity #1 | Chains: A
MYOSIN HEAD protein, length: 830 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 14 3654
95 % 11 14 4450
90 % 14 17 3549
70 % 18 21 2854
50 % 28 50 462
40 % 75 101 300
30 % 98 134 221
Entity #2 | Chains: Y
MYOSIN HEAD protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 18 2792
95 % 15 18 3453
90 % 15 18 3511
70 % 21 24 2242
50 % 26 47 529
40 % 240 357 41
30 % 261 384 50
Entity #3 | Chains: Z
MYOSIN HEAD protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 17 3021
95 % 21 24 2195 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 21 24 2249
70 % 21 24 2245
50 % 25 28 1925
40 % 241 357 41
30 % 262 384 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures