Sequence Similarity Clusters for the Entities in PDB 1DFB

Entity #1 | Chains: L
IGG1-KAPPA 3D6 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58389
95 % 6 13 3148
90 % 333 665 3
70 % 918 1803 2
50 % 2269 4435 1
40 % 2269 4435 1
30 % 2587 5225 1
Entity #2 | Chains: H
IGG1-KAPPA 3D6 FAB (HEAVY CHAIN) protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56916
95 % 1 1 40019
90 % 100 202 49
70 % 1102 2145 1
50 % 2270 4435 1
40 % 2270 4435 1
30 % 2588 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.