Sequence Similarity Clusters for the Entities in PDB 1DF0

Entity #1 | Chains: A
M-CALPAIN protein, length: 700 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25015
95 % 2 4 15378 Flexibility: Medium
Max RMSD: 7.0, Avg RMSD: 4.9
PDBFlex
90 % 3 6 10859
70 % 3 6 10308
50 % 3 6 9336
40 % 3 6 8551
30 % 3 6 7530
Entity #2 | Chains: B
CALPAIN protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 13221
95 % 4 6 9466 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.7
PDBFlex
90 % 18 21 1654
70 % 18 21 1671
50 % 19 22 1534
40 % 19 22 1550
30 % 37 45 604

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.