Sequence Similarity Clusters for the Entities in PDB 1DEX

Entity #1 | Chains: A
RHAMNOGALACTURONAN ACETYLESTERASE protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 15601
95 % 4 5 12562 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 4 5 12382
70 % 4 5 11686
50 % 4 5 10446
40 % 4 5 9473
30 % 4 5 8258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures