Sequence Similarity Clusters for the Entities in PDB 1DEX

Entity #1 | Chains: A
RHAMNOGALACTURONAN ACETYLESTERASE protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 14347
95 % 4 5 13469 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 5 13237
70 % 4 5 12423
50 % 4 5 11051
40 % 4 5 9939
30 % 4 5 8489

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures