Sequence Similarity Clusters for the Entities in PDB 1DEV

Entity #1 | Chains: A,C
MAD (mothers against decapentaplegic, Drosophila) homolog 2 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20443
95 % 3 6 7305
90 % 3 6 7269
70 % 3 8 3873
50 % 3 8 3762
40 % 3 8 3601
30 % 3 8 3352
Entity #2 | Chains: B,D
Smad anchor for receptor activation protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 28491
95 % 1 2 23609
90 % 1 2 22859
70 % 1 2 20923
50 % 1 2 18196
40 % 1 2 16211
30 % 1 2 13915

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.