Sequence Similarity Clusters for the Entities in PDB 1DEV

Entity #1 | Chains: A,C
MAD (mothers against decapentaplegic, Drosophila) homolog 2 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20645
95 % 3 6 7385
90 % 3 6 7349
70 % 3 8 3903
50 % 3 8 3789
40 % 3 8 3630
30 % 3 8 3376
Entity #2 | Chains: B,D
Smad anchor for receptor activation protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 28729
95 % 1 2 23814
90 % 1 2 23057
70 % 1 2 21104
50 % 1 2 18330
40 % 1 2 16327
30 % 1 2 14002

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.