Sequence Similarity Clusters for the Entities in PDB 1DEK

Entity #1 | Chains: A,B
DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21415
95 % 1 2 18658 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 2 18264
70 % 1 2 16943
50 % 1 2 14731
40 % 1 2 13141
30 % 1 2 11260

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures