Sequence Similarity Clusters for the Entities in PDB 1DEJ

Entity #1 | Chains: S
GELSOLIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 12117
95 % 16 29 2032 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 16 29 2078
70 % 16 29 2108
50 % 16 29 2114
40 % 16 29 2091
30 % 16 29 1984
Entity #2 | Chains: A
CHIMERIC ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39543
95 % 66 215 7 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 68 224 8
70 % 71 229 11
50 % 71 236 16
40 % 72 256 26
30 % 73 277 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4CBU 1 A ACTIN-1 5833
2 4B1Y 1 B ACTIN, ALPHA SKELETAL MUSCLE 9986
3 5MVV 1 A Actin-1 5833
4 2FXU 1 A Actin, alpha skeletal muscle 9986
5 4K41 1 A Actin, alpha skeletal muscle 9986
6 2V52 1 B ACTIN, ALPHA SKELETAL MUSCLE 9986
7 1WUA 1 A Actin, alpha skeletal muscle 9986
8 2Q0U 1 A Actin 9986
9 1QZ5 1 A Actin, alpha skeletal muscle 9986
10 2PBD 1 A Actin, alpha skeletal muscle residues 1-377 9986
11 5ZZA 2 A Actin, alpha skeletal muscle 9986
12 3MN5 1 A Actin, alpha skeletal muscle 9986
13 3CIP 1 A Major actin 44689
14 1S22 1 A Actin complexed with Ulapualide A, residue ULA 9986
15 1J6Z 1 A ACTIN ALPHA 1 9986
16 2ASM 1 A Actin, alpha skeletal muscle 9986
17 1QZ6 1 A Actin, alpha skeletal muscle 9986
18 2ASP 1 A Actin, alpha skeletal muscle 9986
19 3CI5 1 A Major actin 44689
20 2Q0R 1 A Actin 9986
21 2ASO 1 A Actin, alpha skeletal muscle 9986
22 3SJH 1 A Actin, alpha skeletal muscle UNP residues 3-377 9986
23 4PKG 1 A Actin, alpha skeletal muscle 9986
24 2PAV 1 A Actin, alpha skeletal muscle 9986
25 4B1V 1 A, B ACTIN, ALPHA SKELETAL MUSCLE RESIDUES 2-377 9986
26 2A40 1 A, D Actin, alpha skeletal muscle 9986
27 4B1X 1 B ACTIN, ALPHA SKELETAL MUSCLE 9986
28 2HF3 1 A Actin-5C 7227
29 2A42 1 A Actin, alpha skeletal muscle 9986
30 2HF4 1 A Actin-5C 7227
31 2GWJ 1 A Actin, alpha skeletal muscle 9986
32 3W3D 1 A Actin, gamma-enteric smooth muscle 9031
33 1NM1 1 A Actin 44689
34 5YEE 1 B Actin, alpha skeletal muscle 9986
35 4H03 2 B Actin, alpha skeletal muscle 9986
36 1NWK 1 A Actin, alpha skeletal muscle 9986
37 1T44 2 A Actin, alpha 9986
38 2HMP 1 A, B actin, alpha skeletal muscle 9986
39 1NLV 1 A Actin 44689
40 1D4X 1 A C. ELEGANS ACTIN 1/3 6239
41 1YAG 1 A PROTEIN (ACTIN) 4932
42 4B1W 1 B ACTIN, ALPHA SKELETAL MUSCLE 9986
43 2GWK 1 A, B Actin, alpha skeletal muscle 9986
44 4PL8 1 A, B Actin, alpha skeletal muscle 9986
45 1NMD 1 A Actin 44689
46 2A3Z 1 A Actin, alpha skeletal muscle 9986
47 1C0G 2 A PROTEIN (CHIMERIC ACTIN) 44689
48 3M6G 1 A, B Actin, alpha skeletal muscle UNP residues 3-373 9986
49 3U9Z 1 A Actin, alpha skeletal muscle 9986
50 3MN9 1 A Actin-5C 7227
51 1YXQ 1 A, B actin, alpha skeletal muscle 9986
52 3U8X 1 A, C Actin, alpha skeletal muscle 9986
53 3MN6 1 A, F, K Actin-5C 7227
54 3EKS 1 A Actin-5C 7227
55 5YPU 1 A, C Actin, alpha skeletal muscle 9986
56 4B1U 1 B ACTIN, ALPHA SKELETAL MUSCLE 9986
57 4H0Y 2 B Actin, alpha skeletal muscle 9986
58 6MGO 1 A Actin, alpha skeletal muscle 9986
59 1YVN 1 A PROTEIN (ACTIN) MG-ATP BOUND ACTIN 4932
60 2FF3 3 B Actin, alpha skeletal muscle 9986
61 1K8K 2 B ACTIN-LIKE PROTEIN 2 part of the Arp2/3 Complex 9913
62 2FF6 3 A Actin, alpha skeletal muscle 9986
63 4H0V 2 B Actin, alpha skeletal muscle 9986
64 3CHW 1 A Major actin 44689
65 1RDW 1 X Actin, alpha skeletal muscle ACtin 9986
66 1ESV 2 A ALPHA ACTIN 9986
67 4PKI 1 A Actin, alpha skeletal muscle 9986
68 1EQY 2 A ALPHA ACTIN 9986
69 1KXP 1 A ACTIN,ALPHA SKELETAL MUSCLE 9986
70 4CBX 1 A ACTIN-2 5821
71 1MDU 2 B, E a-actin 9031
72 1DEJ 2 A CHIMERIC ACTIN 44689
73 5UBO 1 A Actin, alpha skeletal muscle unp residues 1-377 9986
74 3A5O 2 C Major actin 44689
75 3MN7 1 A Actin-5C 7227
76 4H0T 2 B Actin, alpha skeletal muscle 9986
77 2V51 1 B, D ACTIN, ALPHA SKELETAL MUSCLE 9986
78 2VYP 1 A, B ACTIN, ALPHA SKELETAL MUSCLE 9986
79 4EFH 1 A Actin-1 5755
80 3UB5 1 A Actin, cytoplasmic 1 9913
81 3A5M 2 C Major actin 44689
82 1C0F 2 A ACTIN 44689
83 3A5N 2 C Major actin 44689
84 4Z94 1 A Actin, alpha skeletal muscle 9986
85 3A5L 2 C Major actin 44689
86 2Q36 1 A Actin, alpha skeletal muscle 9986
87 2A41 1 A Actin, alpha skeletal muscle 9986
88 1MA9 2 B Actin, Alpha Skeletal Muscle 9986
89 5ZZB 1 B, D Actin, alpha skeletal muscle 9986
90 2A5X 1 A Actin, alpha skeletal muscle 9986
91 4H0X 2 B Actin, alpha skeletal muscle 9986
92 3EKU 1 A Actin-5C 7227
93 3U9D 1 A, C Actin, alpha skeletal muscle 10116
94 2BTF 1 A BETA-ACTIN 9913
95 4PKH 1 A, D, F, I Actin, alpha skeletal muscle 9986
96 4CI6 1 A ACTIN RESIDUES 89-729 7108
97 2P9I 2 B Actin-like protein 2 9913
98 4CBW 1 A ACTIN, ALPHA SKELETAL MUSCLE, ACTIN RESIDUES 40-61 REPLACED BY THOSE OF SKELETAL MUSCLE ACTIN ACTIN RESIDUES 2-39, ALPHA SKELETAL MUSCLE RESIDUES 40-61, 32630
99 5NBL 2 C, D Actin Actin is in an nucleotide free state. 4932
100 1SQK 1 A ACTIN, ALPHA SKELETAL MUSCLE 9986
101 3DAW 1 A Actin, alpha skeletal muscle 9986
102 2D1K 1 A Actin, alpha skeletal muscle 9986
103 3ULE 2 B Actin-related protein 2 9913
104 1P8Z 2 A Actin, alpha skeletal muscle 9986
105 1HLU 1 A BETA-ACTIN 9913
106 1LOT 2 B Actin, alpha skeletal muscle 9986
107 6FM2 1 A Actin, alpha skeletal muscle 9986
108 2OAN 1 A, B, C, D Actin, cytoplasmic 1 9913
109 3EL2 1 A Actin-5C 7227
110 2Q97 1 A Actin, alpha skeletal muscle 9986
111 3U4L 1 A Actin, cytoplasmic 1 9913
112 4GY2 2 B Actin, alpha skeletal muscle 9986
113 1U2V 2 B Actin-Related Protein 2 9913
114 3TU5 1 A Actin, alpha skeletal muscle 9986
115 3HBT 1 A Actin 9986
116 2P9K 2 B Actin-like protein 2 9913
117 3UE5 1 A Actin, alpha skeletal muscle 9986
118 3RSE 2 B Actin-related protein 2 9913
119 1TYQ 2 B Actin-related Protein 2 9913
120 2P9L 2 B Actin-like protein 2 9913
121 2P9S 2 B Actin-like protein 2 9913
122 1ATN 1 A ACTIN 9986
123 3UKR 2 B Actin-related protein 2 9913
124 5CE3 1 A, C Actin 7108
125 4M63 2 C, D, E Actin-5C 7227 3.6.1.3 | Details
126 2P9U 2 B Actin-like protein 2 9913
127 4JHD 1 A, D Actin-5C 7227
128 4JHD 2 B, E Actin-5C 7227
129 1RFQ 1 A, B Actin, alpha skeletal muscle actin 9986
130 5NBM 2 C, D Actin Actin (ATP bound) 4932
131 2Q1N 1 A, B Actin, alpha skeletal muscle 9986
132 3DXK 2 B Actin-related protein 2 9913
133 3M1F 1 A Actin, alpha skeletal muscle 9986
134 3FFK 2 B, E actin, alpha skeletal muscle 9986
135 3BUZ 2 B Actin, alpha skeletal muscle 9986
136 5I9E 2 B, D Actin 4931
137 5WFN 1 A, B Actin-5C 7227
138 4K43 1 A, B Actin, alpha skeletal muscle 9986
139 2Q31 1 A, B Actin, alpha skeletal muscle 9986
140 1IJJ 1 A, B ACTIN, ALPHA SKELETAL MUSCLE 9986
141 1H1V 1 A ACTIN 9986
142 4K42 1 A, B, C, D Actin, alpha skeletal muscle 9986
143 2P9N 2 B Actin-like protein 2 9913
144 4JD2 2 B Actin-related protein 2 9913
145 3MMV 1 A Actin-5C 7227
146 1RGI 2 A Actin, alpha skeletal muscle 9986
147 2P9P 2 B Actin-like protein 2 9913
148 3UKU 2 B ACTIN-LIKE PROTEIN 2 9913
149 3DXM 2 B Actin-related protein 2 9913
150 1LCU 1 A, B Actin, alpha skeletal muscle 9986
151 4B1Z 1 A, B, C, D, E, F ACTIN, ALPHA SKELETAL MUSCLE 9986
152 4RWT 1 A, B Actin-5C UNP residues 1-376 7227
153 2YJE 1 A, B, C ACTIN, ALPHA SKELETAL MUSCLE 9986
154 4WYB 1 A, C, E, G, I, K, M, O, Q, S, U, X Actin, alpha skeletal muscle ATP, Ca 9986
155 3CJB 1 A Actin, alpha skeletal muscle 9986
156 3TPQ 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
157 4EAH 1 D, F, G, H Actin, alpha skeletal muscle 9986
158 5NBN 2 C, D Actin Actin (ATP and Latrunculin A bound) 4932
159 2YJF 1 A, B, C, D, E ACTIN, ALPHA SKELETAL MUSCLE 9986
160 2VCP 1 A, B ACTIN, ALPHA SKELETAL MUSCLE RESIDUES 3-377 9986
161 3CJC 1 A Actin, alpha skeletal muscle 9986
162 1Y64 1 A Actin, alpha skeletal muscle 9986
163 4XEI 2 B Actin-related protein 2 9913
164 6DEC 2 B, I Actin-related protein 2 9913
165 4XF2 2 B, U Actin-related protein 2 9913
166 4V0U 1 A, B, C, L, M ACTIN, ALPHA SKELETAL MUSCLE RESIDUES 3-377 9986
167 6D8C 2 H, J, K, L, M Actin, alpha skeletal muscle 9031
168 6CXI 1 A, B, C, D, E Actin, cytoplasmic 2 9606
169 6CXJ 1 A, B, C, D, E Actin, cytoplasmic 2 9606
170 6G2T 1 A, B, C, D, E, F Actin, cytoplasmic 2 9606
171 6FHL 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
172 6C1D 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
173 6C1G 3 A, B, C, D, E Actin, alpha skeletal muscle 9986
174 6C1H 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
175 6F38 1 A, B, C, D, E, F, G, I ARP1 actin related protein 1 homolog A ADP: Adenosine Diphosphate 9823
176 6F38 2 H Actin, cytoplasmic 1 ATP: Adenosine triphosphate 9823
177 6F3A 1 A, B, C, D, E, F, G, I ARP1 actin related protein 1 homolog A ADP: Adenosine diphosphate 9823
178 6F3A 2 H Actin, cytoplasmic 1 ATP: Adenosine triphosphate 9823
179 6F1T 1 A, B, C, D, E, F, G, I ARP1 actin related protein 1 homolog A ADP: Adenosine diphosphate ligand 9823
180 6F1T 2 H Actin, cytoplasmic 1 ATP: Adenosine triphosphate 9823
181 6F1U 1 B, D, F ARP1 actin related protein 1 homolog A ADP: adenosine diphosphate 9823
182 5YU8 1 A, B, C, D, E Actin, alpha skeletal muscle 9031
183 6BNO 1 A, B, C, D, E, F, G, H Actin, alpha skeletal muscle 9986
184 6BNP 2 A, B, C, D, E, F, G, H Actin, alpha skeletal muscle 9986
185 6BNQ 2 A, B, C, D, E, F, G, H Actin, alpha skeletal muscle 9986
186 6BNU 1 A, B, C, D, E, F, G, H Actin, alpha skeletal muscle 9986
187 6BNV 2 A, B, C, D, E, F, G, H Actin, alpha skeletal muscle 9986
188 6BNW 2 A, B, C, D, E, F, G, H Actin, alpha skeletal muscle 9986
189 6BIH 2 C Actin, alpha skeletal muscle 9986
190 6AV9 1 A, B, C Actin, alpha skeletal muscle 9986
191 6AVB 1 A, B, C Actin, alpha skeletal muscle 9986
192 5Y81 7 G Actin 4932
193 6ANU 1 A, B, C, D, E, F Actin, cytoplasmic 1 9606
194 5OOC 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
195 5OOD 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
196 5OOE 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
197 5OOF 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
198 5ONV 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
199 5OGW 1 A, B, C, D, E Actin-1 5833
200 5NW4 10 G, H, O, P, Q, T, U, W Arp1 9823
201 5NW4 11 V beta-actin 9823
202 5NOG 1 A, B, C, D, E Cardiac muscle alpha actin 1 9823
203 5NOJ 1 A, B, C, D, E Actin, alpha skeletal muscle 9823
204 5NOL 1 A, B, C, D, E Cardiac muscle alpha actin 1 9823
205 5MVY 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W Actin, alpha skeletal muscle 9986
206 5MVA 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W Actin, alpha skeletal muscle 9986
207 5H53 4 D, E Actin, alpha skeletal muscle UNP residues 3-377 9986
208 5KG8 2 B, C, D Actin, alpha skeletal muscle 9986
209 5JLF 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
210 5JLH 1 A, B, C, D, E Actin, cytoplasmic 2 9606
211 3JBJ 1 A, B Actin, alpha skeletal muscle 9986
212 3JBK 1 A, B Actin, alpha skeletal muscle 9986
213 3JBI 1 A, B Actin, alpha skeletal muscle 9986
214 5ADX 1 A, B, C, D, E, F, G, I ACTIN RELATED PROTEIN 1 9823
215 5ADX 2 H ACTIN, CYTOPLASMIC 1 9823
216 5AFU 5 A, B, C, D, E, F, G, I DYNACTIN 9823
217 5AFU 6 H ACTIN, CYTOPLASMIC 1 9823
218 3J8J 1 A, B, C, D, E, F, G, H, I, J, K Actin, alpha skeletal muscle 9986
219 3J8K 1 A, B, C, D, E, F, G, H, I, J Actin, alpha skeletal muscle 9986
220 3J8I 1 D, E, F, G, H Actin, alpha skeletal muscle 9986
221 3J8A 2 A, B, C, D, E Actin, alpha skeletal muscle 9986
222 3J82 2 B, C, D Actin, cytoplasmic 1 9606
223 3J4K 1 A, B, C, D, E Actin, alpha skeletal muscle 9986
224 3J0S 1 A, B, C, D, E, F, G, H, I, J, K, L Actin, cytoplasmic 1 9031
225 4A7F 1 A, D, E, F, I ACTIN, ALPHA SKELETAL MUSCLE 9986
226 4A7H 1 A, D, E, F, G ACTIN, ALPHA SKELETAL MUSCLE 9986
227 4A7L 1 A, D, E, F, I ACTIN, ALPHA SKELETON MUSCLE 9986
228 4A7N 1 A, B, C, D, E F-ACTIN 9986
229 2Y83 1 O, P, Q, R, S, T ACTIN, ALPHA SKELETAL MUSCLE 9986
230 3MFP 1 A Actin, alpha skeletal muscle 9986
231 3M3N 1 A, B Actin, alpha skeletal muscle 9986
232 3LUE 1 A, B, C, D, E, F, G, H, I, J Actin, cytoplasmic 1 9606
233 3G37 1 O, P, Q, R, S, T, U, V, W, X, Y, Z Actin, alpha skeletal muscle 9986
234 2ZWH 1 A Actin, alpha skeletal muscle 9986
235 2W4U 5 D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S ACTIN, ALPHA SKELETAL MUSCLE RESIDUES 3-374 9986
236 2W49 5 D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S ACTIN, ALPHA SKELETAL MUSCLE RESIDUES 3-374 9986
237 3BYH 1 A Actin 9606
238 3B5U 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N Actin, alpha skeletal muscle Holmes Actin model from Fiber Diffraction experiment 9986
239 3B63 1 A, G Actin 6850
240 3B63 2 B Actin 6850
241 3B63 3 C, I Actin 6850
242 3B63 4 D Actin 6850
243 3B63 5 E, H, J, K, N Actin 6850
244 3B63 6 F Actin 6850
245 3B63 7 L, M Actin 6850
246 1O1E 4 1, 2, 3, 4, 5, 6, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
247 1O1G 4 1, 2, 3, 4, 5, 6, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
248 1O1A 4 1, 2, 3, 4, 5, 6, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
249 1O1C 4 0, 1, 2, 3, 4, 5, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
250 1O1D 4 0, 1, 2, 3, 4, 5, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
251 1O19 4 1, 2, 3, 4, 5, 6, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
252 1O1B 4 0, 1, 2, 3, 4, 5, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
253 1O1F 4 0, 1, 2, 3, 4, 5, 6, 7, 8, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
254 1O18 4 1, 2, 3, 4, 5, 6, 7, 8, 9, V, W, X, Y, Z SKELETAL MUSCLE ACTIN 9986
255 1MVW 4 1, 2, 3, 4, 5, 6, 7, 8, 9, V, W, X, Y, Z RABBIT SKELETAL MUSCLE ACTIN 9986
256 1M8Q 4 0, 1, 2, 3, 4, 5, 7, 8, 9, V, W, X, Y, Z Skeletal muscle Actin 9986