Sequence Similarity Clusters for the Entities in PDB 1DEJ

Entity #1 | Chains: S
GELSOLIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 11848
95 % 16 29 1978 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 16 29 2020
70 % 16 29 2048
50 % 16 29 2066
40 % 16 29 2047
30 % 16 29 1946
Entity #2 | Chains: A
CHIMERIC ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38777
95 % 65 214 7 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 67 223 7
70 % 70 228 10
50 % 70 235 14
40 % 71 255 26
30 % 72 276 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1C0G 2 A PROTEIN (CHIMERIC ACTIN) 44689
2 1DEJ 2 A CHIMERIC ACTIN 44689