Sequence Similarity Clusters for the Entities in PDB 1DEJ

Entity #1 | Chains: S
GELSOLIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 11535
95 % 16 29 1935 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 16 29 1973
70 % 16 29 1992
50 % 16 29 2015
40 % 16 29 1991
30 % 16 29 1891
Entity #2 | Chains: A
CHIMERIC ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37874
95 % 62 205 9 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 64 211 9
70 % 67 216 11
50 % 67 223 15
40 % 68 242 26
30 % 69 262 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1C0G 2 A PROTEIN (CHIMERIC ACTIN) 44689
2 1DEJ 2 A CHIMERIC ACTIN 44689