Sequence Similarity Clusters for the Entities in PDB 1DEJ

Entity #1 | Chains: S
GELSOLIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 12117
95 % 16 29 2032 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 16 29 2078
70 % 16 29 2108
50 % 16 29 2114
40 % 16 29 2091
30 % 16 29 1984
Entity #2 | Chains: A
CHIMERIC ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39543
95 % 66 215 7 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 68 224 8
70 % 71 229 11
50 % 71 236 16
40 % 72 256 26
30 % 73 277 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1C0G 1 S PROTEIN (GELSOLIN SEGMENT 1) 9606
2 1DEJ 1 S GELSOLIN SEGMENT 1 9606
3 3A5O 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606
4 3A5M 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606
5 1C0F 1 S GELSOLIN SEGMENT 1 9606
6 3A5N 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606
7 3A5L 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606