Sequence Similarity Clusters for the Entities in PDB 1DEJ

Entity #1 | Chains: S
GELSOLIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 8684
95 % 16 29 2073 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 17 30 2052
70 % 16 29 2241
50 % 16 29 2275
40 % 16 29 2300
30 % 16 29 2300
Entity #2 | Chains: A
CHIMERIC ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63161
95 % 14 51 434 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 65 218 9
70 % 71 233 13
50 % 71 240 15
40 % 72 260 21
30 % 73 281 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures