Sequence Similarity Clusters for the Entities in PDB 1DEJ

Entity #1 | Chains: S
GELSOLIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 7394
95 % 16 28 1911 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 16 28 1955
70 % 16 28 1981
50 % 16 28 1987
40 % 16 28 1979
30 % 16 28 1906
Entity #2 | Chains: A
CHIMERIC ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53775
95 % 62 179 15
90 % 64 184 16
70 % 67 189 23
50 % 67 192 36
40 % 68 211 41
30 % 69 231 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.