Sequence Similarity Clusters for the Entities in PDB 1DEF

Entity #1 | Chains: A
PEPTIDE DEFORMYLASE protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26856
95 % 3 3 23628
90 % 3 3 22859
70 % 3 3 20822
50 % 3 3 17916
40 % 7 7 8306
30 % 126 126 241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures