Sequence Similarity Clusters for the Entities in PDB 1DEF

Entity #1 | Chains: A
PEPTIDE DEFORMYLASE protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45696
95 % 3 3 24689
90 % 3 3 23853
70 % 3 3 21704
50 % 3 3 18759
40 % 7 7 8559
30 % 123 123 234

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures