Sequence Similarity Clusters for the Entities in PDB 1DE7

Entity #1 | Chains: J,L
ALPHA-THROMBIN (LIGHT CHAIN) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 183 331 44
95 % 183 332 60
90 % 183 332 65
70 % 183 334 77
50 % 183 334 101
40 % 183 334 125
30 % 183 334 137
Entity #2 | Chains: H,K
ALPHA-THROMBIN (HEAVY CHAIN) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 162 286 55
95 % 200 370 36
90 % 202 377 38
70 % 202 401 44
50 % 202 401 78
40 % 1020 1635 4
30 % 1098 1777 6
Entity #3 | Chains: A,B
FACTOR XIII ACTIVATION PEPTIDE (28-37) protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.